Abstract
Necrotizing enterocolitis (NEC) is an inflammatory bowel necrosis seen in premature infants. Although the etiopathogenesis of NEC is unclear, genetic factors may alter a patient's susceptibility, clinical course, and outcomes. This review draws from existing studies focused on individual genes and others based on microarray-based high-throughput discovery techniques. We have included evidence from our own studies and from an extensive literature search in the databases PubMed, EMBASE, and Scopus. To avoid bias in the identification of studies, keywords were short-listed a priori from anecdotal experience and PubMed’s Medical Subject Heading (MeSH) thesaurus.
Keywords: Necrotizing enterocolitis, clinical, histopathology, genetic, genomic, microarray, necrosis.
[http://dx.doi.org/10.1053/j.sempedsurg.2017.11.002] [PMID: 29275814]
[http://dx.doi.org/10.1542/peds.2009-2959] [PMID: 20732945]
[http://dx.doi.org/10.1053/j.semperi.2016.09.018] [PMID: 27832931]
[http://dx.doi.org/10.1016/j.jpeds.2012.07.012] [PMID: 22920508]
[http://dx.doi.org/10.1111/j.1651-2227.2003.tb00479.x] [PMID: 12650310]
[http://dx.doi.org/10.1007/s00383-003-1015-4] [PMID: 12756598]
[http://dx.doi.org/10.1055/s-2007-1000050] [PMID: 6680650]
[http://dx.doi.org/10.1001/archpedi.1984.02140500024007] [PMID: 6507393]
[http://dx.doi.org/10.1001/jama.2016.1204] [PMID: 26934258]
[http://dx.doi.org/10.1056/NEJMoa1403489] [PMID: 25607427]
[http://dx.doi.org/10.1038/s41467-019-11199-5] [PMID: 31375667]
[http://dx.doi.org/10.1038/s41390-020-0975-6] [PMID: 32438367]
[http://dx.doi.org/10.1038/s41372-020-0728-8] [PMID: 32669645]
[http://dx.doi.org/10.1038/jp.2015.51] [PMID: 25950918]
[http://dx.doi.org/10.1038/jp.2014.52] [PMID: 24674979]
[http://dx.doi.org/10.1016/S0022-3476(05)81124-2] [PMID: 2362230]
[PMID: 1143976]
[http://dx.doi.org/10.1152/ajpgi.00016.2012] [PMID: 22538401]
[http://dx.doi.org/10.1210/en.2007-1320] [PMID: 18276758]
[http://dx.doi.org/10.1203/01.PDR.0000072326.23442.C3] [PMID: 12736398]
[http://dx.doi.org/10.1016/0720-048X(92)90143-W] [PMID: 1425753]
[http://dx.doi.org/10.1097/RUQ.0000000000000342] [PMID: 29369246]
[http://dx.doi.org/10.1038/pr.2016.189] [PMID: 27656771]
[http://dx.doi.org/10.1152/ajpgi.00141.2012] [PMID: 23154975]
[http://dx.doi.org/10.1152/ajpgi.00039.2013] [PMID: 23558011]
[http://dx.doi.org/10.1152/ajpgi.00126.2015] [PMID: 26045614]
[http://dx.doi.org/10.1053/j.gastro.2010.09.043] [PMID: 20875417]
[http://dx.doi.org/10.1038/pr.2017.219] [PMID: 29068435]
[http://dx.doi.org/10.1016/j.ajpath.2018.11.015] [PMID: 30593820]
[http://dx.doi.org/10.1152/ajpgi.00273.2015] [PMID: 26950855]
[http://dx.doi.org/10.1038/ismej.2009.37] [PMID: 19369970]
[http://dx.doi.org/10.1371/journal.pone.0105046] [PMID: 25203729]
[http://dx.doi.org/10.1186/2049-2618-1-13] [PMID: 24450576]
[http://dx.doi.org/10.1371/journal.pone.0083304] [PMID: 24386174]
[http://dx.doi.org/10.1007/s100249900002] [PMID: 10463267]
[http://dx.doi.org/10.1038/jp.2010.193] [PMID: 21273988]
[http://dx.doi.org/10.1056/NEJMra1005408] [PMID: 21247316]
[http://dx.doi.org/10.2105/AJPH.87.12.2026] [PMID: 9431297]
[http://dx.doi.org/10.1016/j.jss.2008.11.008] [PMID: 19615694]
[http://dx.doi.org/10.1038/pr.2014.48] [PMID: 24732104]
[http://dx.doi.org/10.1016/j.jpeds.2019.11.011] [PMID: 31982088]
[http://dx.doi.org/10.1038/pr.2016.18] [PMID: 26859364]
[http://dx.doi.org/10.1542/peds.2005-1414] [PMID: 16740829]
[http://dx.doi.org/10.1055/s-2007-965788] [PMID: 18302071]
[http://dx.doi.org/10.1001/archpedi.1988.02150090102035] [PMID: 3414612]
[http://dx.doi.org/10.1016/j.jpedsurg.2009.10.069] [PMID: 20152342]
[http://dx.doi.org/10.1038/75556] [PMID: 10802651]
[http://dx.doi.org/10.1016/j.bbrc.2006.01.041] [PMID: 16442497]
[http://dx.doi.org/10.1016/j.coph.2010.08.006] [PMID: 20822955]
[http://dx.doi.org/10.1021/bi00354a035] [PMID: 3964683]
[http://dx.doi.org/10.1074/jbc.M201393200] [PMID: 11971901]
[http://dx.doi.org/10.1038/nprot.2008.211] [PMID: 19131956]
[http://dx.doi.org/10.1203/01.PDR.0000113463.70435.74] [PMID: 14764921]
[http://dx.doi.org/10.1074/jbc.274.24.17193] [PMID: 10358077]
[http://dx.doi.org/10.1006/excr.2001.5303] [PMID: 11525644]
[http://dx.doi.org/10.1016/j.jpedsurg.2011.03.026] [PMID: 21683193]
[http://dx.doi.org/10.1016/j.gene.2018.03.088] [PMID: 29605607]
[http://dx.doi.org/10.3346/jkms.2017.32.5.817] [PMID: 28378556]
[http://dx.doi.org/10.1172/JCI83356] [PMID: 26690704]
[http://dx.doi.org/10.1152/ajpgi.00328.2004] [PMID: 15826931]
[http://dx.doi.org/10.1038/pr.2014.207] [PMID: 25521917]
[http://dx.doi.org/10.4049/jimmunol.179.7.4808] [PMID: 17878380]
[http://dx.doi.org/10.1016/j.jss.2009.11.113]
[http://dx.doi.org/10.1371/journal.pone.0001102] [PMID: 17971865]
[http://dx.doi.org/10.1038/s41390-020-0797-6] [PMID: 32053825]
[http://dx.doi.org/10.1542/peds.2014-3386] [PMID: 25963006]
[http://dx.doi.org/10.1371/journal.pone.0017776] [PMID: 21445298]
[http://dx.doi.org/10.1038/pr.2016.260] [PMID: 27893720]
[http://dx.doi.org/10.1053/j.sempedsurg.2005.05.002] [PMID: 16084401]
[http://dx.doi.org/10.1007/BF02536562] [PMID: 1819729]
[http://dx.doi.org/10.1007/978-1-4899-1813-0_56] [PMID: 9321979]
[PMID: 2327475]
[http://dx.doi.org/10.1203/pdr.0b013e3180534219] [PMID: 17426653]
[http://dx.doi.org/10.1053/j.gastro.2017.08.024] [PMID: 28823863]
[http://dx.doi.org/10.1084/jem.189.11.1839] [PMID: 10359587]
[http://dx.doi.org/10.1182/blood.V94.1.127.413k07_127_138] [PMID: 10381505]
[http://dx.doi.org/10.1152/ajpgi.00053.2009] [PMID: 19460845]
[http://dx.doi.org/10.1016/0753-3322(91)90102-Y] [PMID: 1657236]
[http://dx.doi.org/10.1016/0022-4804(85)90110-6] [PMID: 3876481]
[http://dx.doi.org/10.1016/0022-3468(91)90671-F] [PMID: 1941482]
[http://dx.doi.org/10.1189/jlb.1205734] [PMID: 16888083]
[http://dx.doi.org/10.1073/pnas.0401710101] [PMID: 15123821]
[http://dx.doi.org/10.1016/j.clp.2004.03.003] [PMID: 15183663]
[http://dx.doi.org/10.1080/15513819709168731] [PMID: 9211547]
[http://dx.doi.org/10.1016/S0022-3476(05)80661-4] [PMID: 2348301]
[PMID: 8506954]
[http://dx.doi.org/10.1038/labinvest.2009.119] [PMID: 19901912]
[http://dx.doi.org/10.1016/j.jpeds.2011.05.042] [PMID: 21798559]
[http://dx.doi.org/10.1016/S0022-3476(94)70264-0] [PMID: 8283358]
[http://dx.doi.org/10.1542/peds.103.4.766] [PMID: 10103300]
[PMID: 8858761]
[http://dx.doi.org/10.1136/fn.88.3.F209] [PMID: 12719394]
[http://dx.doi.org/10.1016/j.jpeds.2005.04.037] [PMID: 16227031]
[http://dx.doi.org/10.1371/journal.pone.0058720] [PMID: 23472217]
[http://dx.doi.org/10.1111/j.1651-2227.2009.01600.x] [PMID: 19922507]
[http://dx.doi.org/10.1016/j.jpedsurg.2013.05.068] [PMID: 24650462]
[http://dx.doi.org/10.1055/s-0033-1353437] [PMID: 23966125]
[http://dx.doi.org/10.1016/j.jpedsurg.2006.10.038] [PMID: 17336180]
[http://dx.doi.org/10.1186/s13104-021-05489-9] [PMID: 33663574]
[http://dx.doi.org/10.1007/s11010-017-3135-5] [PMID: 28770467]
[http://dx.doi.org/10.1136/adc.2007.119933] [PMID: 17768156]
[http://dx.doi.org/10.1038/376337a0] [PMID: 7630400]
[http://dx.doi.org/10.1152/ajpgi.00090.2006] [PMID: 16798726]
[http://dx.doi.org/10.1152/ajpgi.00172.2004] [PMID: 15528252]
[http://dx.doi.org/10.1152/ajpgi.00196.2001] [PMID: 11751169]
[http://dx.doi.org/10.1159/000090015] [PMID: 16319449]
[http://dx.doi.org/10.1016/j.jpeds.2006.11.059] [PMID: 17382110]
[http://dx.doi.org/10.1073/pnas.1200856109] [PMID: 22733781]
[http://dx.doi.org/10.1016/S0091-6749(99)70021-7] [PMID: 10589009]
[http://dx.doi.org/10.1126/science.8009224] [PMID: 8009224]
[http://dx.doi.org/10.1016/s1286-4579(99)00254-3] [PMID: 10611758]
[http://dx.doi.org/10.1203/00006450-199908000-00012] [PMID: 10447115]
[http://dx.doi.org/10.1159/000314109] [PMID: 20881435]
[http://dx.doi.org/10.1038/pr.2014.96] [PMID: 24995914]
[http://dx.doi.org/10.1016/j.clp.2015.04.014] [PMID: 26250918]
[http://dx.doi.org/10.1111/j.1600-0463.2003.apm1111204.x] [PMID: 14678018]
[http://dx.doi.org/10.1152/ajpgi.00272.2013] [PMID: 24407592]
[http://dx.doi.org/10.1152/ajpgi.00278.2012] [PMID: 23518680]
[http://dx.doi.org/10.1016/j.clp.2004.03.001] [PMID: 15183665]
[http://dx.doi.org/10.1038/sj.jp.7211306] [PMID: 15830001]
[http://dx.doi.org/10.4081/hmr.v2i10.457]
[PMID: 17353160]
[http://dx.doi.org/10.1046/j.1365-2249.1998.00718.x] [PMID: 9844046]
[http://dx.doi.org/10.1093/ajcn/72.5.1196] [PMID: 11063449]
[http://dx.doi.org/10.1159/000368879] [PMID: 25659996]
[http://dx.doi.org/10.1016/j.pedneo.2018.07.002] [PMID: 30100520]
[http://dx.doi.org/10.1091/mbc.1.11.811] [PMID: 2088527]
[http://dx.doi.org/10.1016/j.jpedsurg.2006.09.055] [PMID: 17208569]
[http://dx.doi.org/10.1016/j.jpedsurg.2005.12.020] [PMID: 16567187]
[http://dx.doi.org/10.1016/j.jpedsurg.2005.10.018] [PMID: 16410124]
[http://dx.doi.org/10.1053/j.gastro.2009.03.060] [PMID: 19361505]
[http://dx.doi.org/10.1016/j.jss.2015.03.023] [PMID: 25913486]
[http://dx.doi.org/10.1210/endo-128-6-3169] [PMID: 2036983]
[http://dx.doi.org/10.1152/ajpgi.00064.2013] [PMID: 23764891]
[http://dx.doi.org/10.1097/MPG.0b013e318286891e] [PMID: 23343934]
[http://dx.doi.org/10.1016/j.peptides.2015.07.025] [PMID: 26551873]
[http://dx.doi.org/10.1097/MPG.0b013e31824e5f7a] [PMID: 22331020]
[http://dx.doi.org/10.1038/pr.2015.1] [PMID: 25642664]
[http://dx.doi.org/10.2174/1573396309666140101235126] [PMID: 25088341]
[http://dx.doi.org/10.3109/14767058.2012.663197] [PMID: 22339378]
[http://dx.doi.org/10.1055/s-0041-1727156] [PMID: 33853144]
[http://dx.doi.org/10.1016/j.siny.2018.08.006] [PMID: 30292709]
[http://dx.doi.org/10.1016/S0022-3476(97)70158-6] [PMID: 9290608]
[http://dx.doi.org/10.1067/mpd.2002.124306] [PMID: 12006949]
[http://dx.doi.org/10.1002/14651858.CD004339.pub3] [PMID: 17636753]
[http://dx.doi.org/10.1038/s41598-020-78125-4] [PMID: 33273558]
[http://dx.doi.org/10.1097/MPG.0000000000002941] [PMID: 32925548]
[http://dx.doi.org/10.3233/NPM-190302] [PMID: 31985475]
[http://dx.doi.org/10.1152/ajpgi.00046.2019] [PMID: 31314571]
[http://dx.doi.org/10.1038/s41385-019-0169-x] [PMID: 31086271]
[http://dx.doi.org/10.1186/s40168-018-0547-8] [PMID: 30208950]