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Recent Patents on Engineering

Editor-in-Chief

ISSN (Print): 1872-2121
ISSN (Online): 2212-4047

Research Article

COVID-19 Improved Diagnoses Based on the Open-morphology Filter and Deep-learning

Author(s): Majid D. Younus, Mohammad J.M. Zedan, Fahad L. Malallah* and Mustafa G. Saeed

Volume 16, Issue 3, 2022

Published on: 18 June, 2021

Article ID: e180621194172 Pages: 9

DOI: 10.2174/1872212115666210618120249

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Abstract

Background: Coronavirus (COVID-19) has appeared first time in Wuhan, China, as an acute respiratory syndrome and spread rapidly. It has been declared a pandemic by the WHO. Thus, there is an urgent need to develop an accurate computer-aided method to assist clinicians in identifying COVID-19-infected patients by computed tomography CT images. The contribution of this paper is that it proposes a pre-processing technique that increases the recognition rate compared to the techniques existing in the literature.

Methods: The proposed pre-processing technique, which consists of both contrast enhancement and open-morphology filter, is highly effective in decreasing the diagnosis error rate. After carrying out pre-processing, CT images are fed to a 15-layer convolution neural network (CNN) as deep-learning for the training and testing operations. The dataset used in this research has been publically published, in which CT images were collected from hospitals in Sao Paulo, Brazil. This dataset is composed of 2482 CT scans images, which include 1252 CT scans of SARS-CoV-2 infected patients and 1230 CT scans of non-infected SARS-CoV-2 patients.

Results: The proposed detection method achieves up to 97.8% accuracy, which outperforms the reported accuracy of the dataset by 97.3%.

Conclusion: The performance in terms of accuracy has been improved up to 0.5% by the proposed methodology over the published dataset and its method.

Keywords: COVID-19, CNN, open-morphology filter, deep-learning, pattern recognition, image processing.

Graphical Abstract

[1]
E. Soares, "SARS-CoV-2 CT-scan dataset: A large dataset of real patients CT scans for SARS-CoV-2 identification", medRxiv, 2020.
[2]
J.T. Wu, K. Leung, and G.M. Leung, "Nowcasting and forecasting the potential domestic and international spread of the 2019-nCoV outbreak originating in Wuhan, China: A modelling study", Lancet, vol. 395, no. 10225, pp. 689-697, 2020.
[http://dx.doi.org/10.1016/S0140-6736(20)30260-9] [PMID: 32014114]
[3]
C. Wang, P.W. Horby, F.G. Hayden, and G.F. Gao, "A novel coronavirus outbreak of global health concern", Lancet, vol. 395, no. 10223, pp. 470-473, 2020.
[http://dx.doi.org/10.1016/S0140-6736(20)30185-9] [PMID: 31986257]
[4]
N.C. Peeri, N. Shrestha, M.S. Rahman, R. Zaki, Z. Tan, S. Bibi, M. Baghbanzadeh, N. Aghamohammadi, W. Zhang, and U. Haque, "The SARS, MERS and novel coronavirus (COVID-19) epidemics, the newest and biggest global health threats: What lessons have we learned?", Int. J. Epidemiol., vol. 49, no. 3, pp. 717-726, 2020.
[http://dx.doi.org/10.1093/ije/dyaa033] [PMID: 32086938]
[5]
L. Meng, F. Hua, and Z. Bian, "Coronavirus disease 2019 (COVID-19): Emerging and future challenges for dental and oral medicine", J. Dent. Res., vol. 99, no. 5, pp. 481-487, 2020.
[http://dx.doi.org/10.1177/0022034520914246] [PMID: 32162995]
[6]
S. Feng, C. Shen, N. Xia, W. Song, M. Fan, and B.J. Cowling, "Rational use of face masks in the COVID-19 pandemic", Lancet Respir. Med., vol. 8, no. 5, pp. 434-436, 2020.
[http://dx.doi.org/10.1016/S2213-2600(20)30134-X] [PMID: 32203710]
[7]
Y. Fang, H. Zhang, J. Xie, M. Lin, L. Ying, P. Pang, and W. Ji, "Sensitivity of chest ct for covid-19: Comparison to RT-PCR", Radiology, vol. 296, no. 2, pp. E115-E117, 2020.
[http://dx.doi.org/10.1148/radiol.2020200432] [PMID: 32073353]
[8]
P. Huang, S. Park, R. Yan, J. Lee, L.C. Chu, C.T. Lin, A. Hussien, J. Rathmell, B. Thomas, C. Chen, R. Hales, D.S. Ettinger, M. Brock, P. Hu, E.K. Fishman, E. Gabrielson, and S. Lam, "Added value of computer-aided CT image features for early lung cancer diagnosis with small pulmonary nodules: A matched case-control study", Radiology, vol. 286, no. 1, pp. 286-295, 2018.
[http://dx.doi.org/10.1148/radiol.2017162725] [PMID: 28872442]
[9]
L. Wang, Y. Wang, D. Ye, and Q. Liu, "A review of the 2019 novel coronavirus (COVID-19) based on current evidence", Int. J. Antimicrob. Agents, vol. 56, no. 3, p. 106137, 2020.
[http://dx.doi.org/10.1016/j.ijantimicag.2020.106137] [PMID: 32826129]
[10]
C. Huang, Y. Wang, X. Li, L. Ren, J. Zhao, Y. Hu, L. Zhang, G. Fan, J. Xu, X. Gu, Z. Cheng, T. Yu, J. Xia, Y. Wei, W. Wu, X. Xie, W. Yin, H. Li, M. Liu, Y. Xiao, H. Gao, L. Guo, J. Xie, G. Wang, R. Jiang, Z. Gao, Q. Jin, J. Wang, and B. Cao, "Clinical features of patients infected with 2019 novel coronavirus in Wuhan, China", Lancet, vol. 395, no. 10223, pp. 497-506, 2020.
[http://dx.doi.org/10.1016/S0140-6736(20)30183-5] [PMID: 31986264]
[11]
J.K. Adeniyi, A multiple algorithm approach to textural features extraction in offline signature recognition.
[12]
H. Kim, H. Hong, and S.H. Yoon, "Diagnostic performance of CT and reverse transcriptase-polymerase chain reaction for coronavirus disease 2019: A meta-analysis", Radiology, vol. 296, no. 3, pp. E145-E155, 2020.
[http://dx.doi.org/10.1148/radiol.2020201343] [PMID: 32301646]
[13]
L. Wang, "The clinical dynamics of 18 cases of COVID-19 outside of Wuhan, China", European respiratory journal, vol. 55, 2020.
[14]
O. Gozes, "Rapid ai development cycle for the coronavirus (covid- 19) pandemic: Initial results for automated detection & patient monitoring using deep learning ct image analysis", arXiv preprint arXiv:2003.05037, 2020.
[15]
M. Mahmud, M.S. Kaiser, A. Hussain, and S. Vassanelli, "Applications of deep learning and reinforcement learning to biological data", IEEE Trans. Neural Netw. Learn. Syst., vol. 29, no. 6, pp. 2063-2079, 2018.
[http://dx.doi.org/10.1109/TNNLS.2018.2790388] [PMID: 29771663]
[16]
X. Liu, S. Guo, B. Yang, S. Ma, H. Zhang, J. Li, C. Sun, L. Jin, X. Li, Q. Yang, and Y. Fu, "Automatic organ segmentation for CT scans based on super-pixel and convolutional neural networks", J. Digit. Imaging, vol. 31, no. 5, pp. 748-760, 2018.
[http://dx.doi.org/10.1007/s10278-018-0052-4] [PMID: 29679242]
[17]
J. Choe, S.M. Lee, K.H. Do, G. Lee, J.G. Lee, S.M. Lee, and J.B. Seo, "Deep learning–based image conversion of CT reconstruction kernels improves radiomics reproducibility for pulmonary nodules or masses", Radiology, vol. 292, no. 2, pp. 365-373, 2019.
[http://dx.doi.org/10.1148/radiol.2019181960] [PMID: 31210613]
[18]
F. Shan, "Lung infection quantification of covid-19 in ct images with deep learning", arXiv preprint arXiv:2003.04655, 2020.
[19]
M. Barstugan, "Coronavirus (covid-19) classification using ct images by machine learning methods", arXiv preprint arXiv:2003.09424, 2020.
[20]
F. Shi, "Large-scale screening of covid-19 from community acquired pneumonia using infection size-aware classification", arXiv preprint arXiv:2003.09860, 2020.
[21]
Z. Wang, "Masked face recognition dataset and application", arXiv preprint arXiv:2003.09093, 2020.
[22]
Y. Song, "Deep learning enables accurate diagnosis of novel coronavirus (COVID-19) with CT images", medRxiv, 2020.
[23]
J. Chen, "Deep learning-based model for detecting 2019 novel coronavirus pneumonia on high-resolution computed tomography: A prospective study", MedRxiv, 2020.
[http://dx.doi.org/10.1038/s41598-020-76282-0]
[24]
X. Qi, "Machine learning-based CT radiomics model for predicting hospital stay in patients with pneumonia associated with SARS-CoV-2 infection: A multicenter study", medRxiv, 2020.
[25]
C. Zheng, "Deep learning-based detection for COVID-19 from chest CT using weak label", medRxiv, 2020.
[26]
S. Jin, "AI-assisted CT imaging analysis for COVID-19 screening: Building and deploying a medical AI system in four weeks", medRxiv, 2020.
[27]
S. Wang, Y. Zha, W. Li, Q. Wu, X. Li, M. Niu, M. Wang, X. Qiu, H. Li, H. Yu, W. Gong, Y. Bai, L. Li, Y. Zhu, L. Wang, and J. Tian, "A fully automatic deep learning system for COVID-19 diagnostic and prognostic analysis", Eur. Respir. J., vol. 56, no. 2, p. 2000775, 2020.
[http://dx.doi.org/10.1183/13993003.00775-2020] [PMID: 32444412]
[28]
M. Zhou, "Improved deep learning model for differentiating novel coronavirus pneumonia and influenza pneumonia", medRxiv, 2020.
[29]
C. Butt, J. Gill, D. Chun, and B. A. Babu, “Deep learning system to screen coronavirus disease 2019 pneumonia", Appl. Intell., p. 1, 2020, "RETRACTED ARTICLE".
[30]
P. Maragos, "A representation theory for morphological image and signal processing", IEEE Trans. Pattern Anal. Mach. Intell., vol. 11, pp. 586-599, 1989.
[http://dx.doi.org/10.1109/34.24793]
[31]
E.R. Dougherty, and R.A. Lotufo, Hands-on morphological image processing, vol. 59. SPIE press, 2003.
[http://dx.doi.org/10.1117/3.501104]
[32]
F. L. Malallah, "Smiling and non-smiling emotion recognition based on lower-half face using deep-learning as convolutional neural network".
[http://dx.doi.org/10.4108/eai.28-6-2020.2298175]
[33]
A. Tharwat, "Classification assessment methods", Applied computing and informatics, 2020.
[34]
D.M. Powers, "Evaluation: From precision, recall and F-measure to ROC, informedness, markedness and correlation", arXiv preprint arXiv:2010.16061, 2020.

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