Abstract
Many complex systems such as biological and social systems can be modeled using graph structures called biological networks and social networks. Instead of studying separately each of the elements composing such complex systems, it is easier to study the networks representing the interactions between the elements of these systems. A commonly known fact in biological and social networks’ analysis is that in most networks some important or influential elements (e.g. essential proteins in PPI networks) are placed in some particular positions in a network. These positions (i.e. vertices) have some particular structural properties. Centrality measures quantify such facts from different points of view. Based on centrality measures the graph elements such as vertices and edges can be ranked from different points of view. Top ranked elements in the graph are supposed to play an important role in the network. This paper presents a comprehensive review of existing different centrality measures and their applications in some biological networks such as Protein-Protein interaction network, residue interaction and gene–gene interaction networks.
Keywords: Centrality measures, graph structures, network analysis, network structures.
Current Bioinformatics
Title:Centrality Measures in Biological Networks
Volume: 9 Issue: 4
Author(s): Mahdieh Ghasemi, Hossein Seidkhani, Faezeh Tamimi, Maseud Rahgozar and Ali Masoudi-Nejad
Affiliation:
Keywords: Centrality measures, graph structures, network analysis, network structures.
Abstract: Many complex systems such as biological and social systems can be modeled using graph structures called biological networks and social networks. Instead of studying separately each of the elements composing such complex systems, it is easier to study the networks representing the interactions between the elements of these systems. A commonly known fact in biological and social networks’ analysis is that in most networks some important or influential elements (e.g. essential proteins in PPI networks) are placed in some particular positions in a network. These positions (i.e. vertices) have some particular structural properties. Centrality measures quantify such facts from different points of view. Based on centrality measures the graph elements such as vertices and edges can be ranked from different points of view. Top ranked elements in the graph are supposed to play an important role in the network. This paper presents a comprehensive review of existing different centrality measures and their applications in some biological networks such as Protein-Protein interaction network, residue interaction and gene–gene interaction networks.
Export Options
About this article
Cite this article as:
Ghasemi Mahdieh, Seidkhani Hossein, Tamimi Faezeh, Rahgozar Maseud and Masoudi-Nejad Ali, Centrality Measures in Biological Networks, Current Bioinformatics 2014; 9 (4) . https://dx.doi.org/10.2174/15748936113086660013
DOI https://dx.doi.org/10.2174/15748936113086660013 |
Print ISSN 1574-8936 |
Publisher Name Bentham Science Publisher |
Online ISSN 2212-392X |
- Author Guidelines
- Graphical Abstracts
- Fabricating and Stating False Information
- Research Misconduct
- Post Publication Discussions and Corrections
- Publishing Ethics and Rectitude
- Increase Visibility of Your Article
- Archiving Policies
- Peer Review Workflow
- Order Your Article Before Print
- Promote Your Article
- Manuscript Transfer Facility
- Editorial Policies
- Allegations from Whistleblowers
Related Articles
-
The Cannabinoids Switch of Oxidative Stress: A Double-Edged Sword
Mini-Reviews in Organic Chemistry Stress Hormone-Mediated DNA Damage Response -- Implications for Cellular Senescence and Tumour Progression
Current Drug Targets Update of Targeted Therapy-Induced Hypertension: Basics for Non-Oncology Providers
Current Hypertension Reviews Optical Imaging of Microvascular Morphology and Perfusion
Current Angiogenesis (Discontinued) Renal and Cardiac Effects of Renal Sympathetic Denervation and Carotid Baroreceptor Stimulation
Current Vascular Pharmacology The Role of the Immune System in the Pathogenesis of Hypertension
Current Hypertension Reviews Therapy of Chronic Hepatitis C: A Critical Review
Current Drug Targets - Infectious Disorders The Innovations in Pulmonary Hypertension Pathophysiology and Treatment: What are our Options!
Current Respiratory Medicine Reviews Should all Hypertensive Patients be Screened for Primary Aldosteronism?
Current Hypertension Reviews Acute Phase Proteins In Acute Coronary Syndrome: An up-to-date
Cardiovascular & Hematological Agents in Medicinal Chemistry Medicinal Plants with Multiple Effects on Cardiovascular Diseases: A Systematic Review
Current Pharmaceutical Design Effect of Estrogen Receptor- Alpha Gene Polymorphism (IVS1-397 T>C) on Microvascular Complications of Type 1 Diabetes Mellitus
Current Diabetes Reviews Advanced Glycation and ROS: A Link between Diabetes and Heart Failure
Current Vascular Pharmacology Patent Selections
Recent Patents on Biotechnology Animal Models of Obesity and Metabolic Syndrome: Potential Tools for Alzheimers Disease Research
Current Alzheimer Research A Case of Topiramate-Induced Epistaxis
Current Drug Safety Pulmonary Hypertension: Role of Combination Therapy
Current Vascular Pharmacology The Role of Combined Assessment of Defense Against Oxidative Stress and Inflammation in the Evaluation of Peripheral Arterial Disease
Current Molecular Medicine Anxiolytic-Like Effect of Underground Parts of Ajuga remota Benth (Lamiaceae) and Its Bioactive Constituents in Mice: A Behavioral Study
The Natural Products Journal Statins and Portal Hypertension: A New Pharmacological Challenge
Current Vascular Pharmacology