Abstract
In this paper we address the acceleration of the Hermite function characterization of the heartbeat by means of massively parallel Graphics Processing Units. This characterization can be used to develop tools to help the cardiologist to study and diagnose heart disease. However, obtaining this characterization, especially when a large number of functions is used to achieve a high accuracy in heartbeat representation, is very resource intensive. This paper addresses off-line and on-line heartbeat characterization, assessing the acceleration capabilities of Graphics Processing Units for these tasks. Polynomials up to the 30th order are used in the study. The results yield that the off-line processing of long electrocardiogram recordings with a GPU can be computed up to 186 faster than a standard CPU, while real-time processing can be up to 110x faster.
Keywords: Electrocardiogram, Hermite polynomials, graphics processing unit, CUDA, arrhythmia, clustering.
Graphical Abstract
Current Bioinformatics
Title:GPU-Based Acceleration of ECG Characterization Using High-Order Hermite Polynomials
Volume: 11 Issue: 4
Author(s): Alberto Gil, David G. Márquez, Gabriel Caffarena, Ana Iriarte and Abraham Otero
Affiliation:
Keywords: Electrocardiogram, Hermite polynomials, graphics processing unit, CUDA, arrhythmia, clustering.
Abstract: In this paper we address the acceleration of the Hermite function characterization of the heartbeat by means of massively parallel Graphics Processing Units. This characterization can be used to develop tools to help the cardiologist to study and diagnose heart disease. However, obtaining this characterization, especially when a large number of functions is used to achieve a high accuracy in heartbeat representation, is very resource intensive. This paper addresses off-line and on-line heartbeat characterization, assessing the acceleration capabilities of Graphics Processing Units for these tasks. Polynomials up to the 30th order are used in the study. The results yield that the off-line processing of long electrocardiogram recordings with a GPU can be computed up to 186 faster than a standard CPU, while real-time processing can be up to 110x faster.
Export Options
About this article
Cite this article as:
Gil Alberto, Márquez G. David, Caffarena Gabriel, Iriarte Ana and Otero Abraham, GPU-Based Acceleration of ECG Characterization Using High-Order Hermite Polynomials, Current Bioinformatics 2016; 11 (4) . https://dx.doi.org/10.2174/1574893611666160212235711
DOI https://dx.doi.org/10.2174/1574893611666160212235711 |
Print ISSN 1574-8936 |
Publisher Name Bentham Science Publisher |
Online ISSN 2212-392X |
- Author Guidelines
- Graphical Abstracts
- Fabricating and Stating False Information
- Research Misconduct
- Post Publication Discussions and Corrections
- Publishing Ethics and Rectitude
- Increase Visibility of Your Article
- Archiving Policies
- Peer Review Workflow
- Order Your Article Before Print
- Promote Your Article
- Manuscript Transfer Facility
- Editorial Policies
- Allegations from Whistleblowers
Related Articles
-
Cognitive and Cardiovascular Benefits of Docosahexaenoic Acid in Aging and Cognitive Decline
Current Alzheimer Research Is Mental Practice an Effective Adjunct Therapeutic Strategy for Upper Limb Motor Restoration After Stroke? A Systematic Review and Meta- Analysis
CNS & Neurological Disorders - Drug Targets Lipid Rafts and Redox Regulation of Cellular Signaling in Cholesterol Induced Atherosclerosis
Current Cardiology Reviews Tuberculosis Infections of the Central Nervous System
Central Nervous System Agents in Medicinal Chemistry Bioresorbable Vascular Scaffold: Our Initial Experience
Applied Clinical Research, Clinical Trials and Regulatory Affairs Understanding Heterogeneity in Supplementation Effects of Selenium in Men: A Study of Stratification Variables and Human Genetics in a Prospective Sample from New Zealand
Current Pharmacogenomics and Personalized Medicine The High Mobility Group A1 (HMGA1) Transcriptome in Cancer and Development
Current Molecular Medicine Mast Cell Chymase and Tryptase as Targets for Cardiovascular and Metabolic Diseases
Current Pharmaceutical Design Why is the Inhibition of the Renin-Angiotensin System Effective for Preventing Cardiac Events in Patients with Coronary Risk Factors or Coronary Artery Disease?
Current Cardiology Reviews Rational Discovery of Novel Squalene Synthase Inhibitors through Pharmacophore Modelling
Current Computer-Aided Drug Design Cardiovascular Risk in Postmenopausal Women with Polycystic Ovary Syndrome
Current Vascular Pharmacology Synthesis and Preliminary Antihyperlipidaemic Activities Evaluation of Andrographolide Derivatives
Medicinal Chemistry Pharmacogenetic Applications of the Post Genomic Era
Current Pharmaceutical Biotechnology Restoring the Dysfunctional Endothelium
Current Pharmaceutical Design Energetic Metabolic Roles in Pulmonary Arterial Hypertension and Right Ventricular Remodeling
Current Pharmaceutical Design Present Drug Therapy of Demyelinating Disorders
Current Drug Therapy Omega-3 Polyunsaturated Fatty Acids: Their Potential Role in Blood Pressure Prevention and Management
Current Vascular Pharmacology Three Dimensional Echocardiography: Recent Trends in Segmen tation Methods
Current Medical Imaging Protein Kinases and Associated Pathways in Pluripotent State and Lineage Differentiation
Current Stem Cell Research & Therapy RNAi in Clinical Studies
Current Medicinal Chemistry