Search Result "position-specific scoring matrix (PSSM)."


Predicting Protein Metal Binding Sites with RBF Networks based on PSSM Profiles and Additional Properties

Journal: Current Bioinformatics
Volume: 7 Issue: 2 Year: 2012 Page: 180-186
Author(s): Yu-Yen Ou

Identifying GPCRs and their Types with Chou’s Pseudo Amino Acid Composition: An Approach from Multi-scale Energy Representation and Position Specific Scoring Matrix

Journal: Protein & Peptide Letters
Volume: 19 Issue: 8 Year: 2012 Page: 890-903
Author(s): Zia-ur-Rehman,Asifullah Khan

Predicting Caspase Substrate Cleavage Sites Based on a Hybrid SVMPSSM Method

Journal: Protein & Peptide Letters
Volume: 17 Issue: 1 Year: 2010 Page: 1566-1571
Author(s): Dandan Li, Zhenran Jiang, Weiming Yu, Lei Du

Research Article

DBP-PSSM: Combination of Evolutionary Profiles with the XGBoost Algorithm to Improve the Identification of DNA-binding Proteins

Journal: Combinatorial Chemistry & High Throughput Screening
Volume: 25 Issue: 1 Year: 2022 Page: 3-12
Author(s): Yanping Zhang,Pengcheng Chen,Ya Gao,Jianwei Ni,Xiaosheng Wang

Research Article

Deep Convolutional Neural Networks for Predicting Hydroxyproline in Proteins

Journal: Current Bioinformatics
Volume: 12 Issue: 3 Year: 2017 Page: 233-238
Author(s): HaiXia Long,Mi Wang,HaiYan Fu

Prediction of Nicotinamide Adenine Dinucleotide Interacting Sites Based on Ensemble Support Vector Machine

Journal: Protein & Peptide Letters
Volume: 19 Issue: 5 Year: 2012 Page: 559-566
Author(s): Xia Wang,Cui-Cui Wang,Yong-Qing Zhang,Gang Mi,Juan Zhang,Meng-Long Li

SVM-PB-Pred: SVM Based Protein Block Prediction Method Using Sequence Profiles and Secondary Structures

Journal: Protein & Peptide Letters
Volume: 21 Issue: 8 Year: 2014 Page: 736-742
Author(s): V. Suresh,S. Parthasarathy

Review Article

Feature Extractions for Computationally Predicting Protein Post- Translational Modifications

Journal: Current Bioinformatics
Volume: 13 Issue: 4 Year: 2018 Page: 387-395
Author(s): Guohua Huang,Jincheng Li

Research Article

iAnt: Combination of Convolutional Neural Network and Random Forest Models Using PSSM and BERT Features to Identify Antioxidant Proteins

Journal: Current Bioinformatics
Volume: 17 Issue: 2 Year: 2022 Page: 184-195
Author(s): Hoang V. Tran,Quang H. Nguyen

A Computational Identification Method for GPI-Anchored Proteins by Artificial Neural Network

Journal: Current Bioinformatics
Volume: 7 Issue: 2 Year: 2012 Page: 125-131
Author(s): Yuri Mukai,Hirotaka Tanaka,Masao Yoshizawa,Osamu Oura,Takanori Sasaki,Masami Ikeda

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