Search Result "Binding energy analysis"


Estimation of the Binding Free Energy by Linear Interaction Energy Models

Journal: Mini-Reviews in Medicinal Chemistry
Volume: 12 Issue: 6 Year: 2012 Page: 551-561
Author(s): O. Nicolotti,M. Convertino,F. Leonetti,M. Catto,S. Cellamare,A. Carotti

Atomistic Models for Free Energy Evaluation of Drug Binding to Membrane Proteins

Journal: Current Medicinal Chemistry
Volume: 18 Issue: 1 Year: 2011 Page: 2601-2611
Author(s): S. Durdagi, C. Zhao, J. E. Cuervo, S. Y. Noskov

Identification and Analysis of Binding Site Residues in Proteincarbohydrate Complexes using Energy Based Approach

Journal: Protein & Peptide Letters
Volume: 21 Issue: 8 Year: 2014 Page: 799-807
Author(s): M. Michael Gromiha,K. Veluraja,Kazuhiko Fukui

Identifying Protein-Protein Binding Sites with a Combined Energy Function

Journal: Current Protein & Peptide Science
Volume: 15 Issue: 6 Year: 2014 Page: 540-552
Author(s): Fei Guo,Shuai C. Li,Ying Fan,Lusheng Wang

Free Energy Calculations and Binding Analysis of Two Potential Anti- Influenza Drugs with Polymerase Basic Protein-2 (PB2)

Journal: Protein & Peptide Letters
Volume: 18 Issue: 1 Year: 2011 Page: 1002-1009
Author(s): Hui-Min Lv, Xiao-Li Guo, Ruo-Xu Gu, Dong-Qing Wei

Molecular Recognition and Binding Free Energy Calculations in Drug Development

Journal: Current Pharmaceutical Biotechnology
Volume: 9 Issue: 2 Year: 2008 Page: 87-95
Author(s): B. N. Dominy

Comparative Binding Energy (COMBINE) Analysis of Human Neutrophil Elastase Inhibition by Pyridone-containing Trifluoromethylketones

Journal: Combinatorial Chemistry & High Throughput Screening
Volume: 4 Issue: 8 Year: 2001 Page: 627-642
Author(s): Carmen Cuevas, Manuel Pastor, Carlos Perez, Federico Gago

Overview of Binding Free Energy Calculation Techniques for Elucidation of Biological Processes and for Drug Discovery

Journal: Medicinal Chemistry
Volume: 11 Issue: 3 Year: 2015 Page: 248-253
Author(s): Takeshi Ashida, Takeshi Kikuchi

Research Article open access plus

Extracting Atomic Contributions to Binding Free Energy Using MolecularDynamics Simulations with Mixed Solvents (MDmix)

Journal: Current Drug Discovery Technologies
Volume: 19 Issue: 2 Year: 2022 Page: 62-68
Author(s): Peter Schmidtke,Elena Cubero,Xavier Barril

Review Article

A Critical Review of Validation, Blind Testing, and Real- World Use of Alchemical Protein-Ligand Binding Free Energy Calculations

Journal: Current Topics in Medicinal Chemistry
Volume: 17 Issue: 23 Year: 2017 Page: 2577-2585
Author(s): Robert Abel,Lingle Wang,David L. Mobley,Richard A. Friesner

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