Search Result "Alignment free sequence comparison"


Alignment-Free Sequence Comparison Using N-Dimensional Similarity Space

Journal: Current Computer-Aided Drug Design
Volume: 6 Issue: 4 Year: 2010 Page: 290-296
Author(s): Ramamurthy Jayalakshmi, Ramanathan Natarajan, Munusamy Vivekanandan, Ganapathy S. Natarajan

An Alignment-Free Method for Classification of Protein Sequences

Journal: Protein & Peptide Letters
Volume: 14 Issue: 7 Year: 2007 Page: 647-657
Author(s): Sandeep Deshmukh, Sanjeet Khaitan, Debasish Das, Manish Gupta, Pramod P. Wangikar

A 2D Pattern Matching Algorithm for Comparing Primary Protein Sequences

Journal: Current Bioinformatics
Volume: 9 Issue: 3 Year: 2014 Page: 210-217
Author(s): Guohua Huang,Weiping Huang,Wenping Xie,Yongfan Li,Lixin Xu,Houqing Zhou

Align: a C++ Class Library and Web Server for Rapid Sequence Alignment Prototyping

Journal: Current Drug Discovery Technologies
Volume: 3 Issue: 3 Year: 2006 Page: 167-173
Author(s): Silvio C.E. Tosatto, Alessandro Albiero, Alessandra Mantovan, Carlo Ferrari, Eckart Bindewald, Stefano Toppo

Dissimilarities in Alignment-Free Methods for Phylogenetic Analysis Based on Genomes

Journal: Current Bioinformatics
Volume: 9 Issue: 3 Year: 2014 Page: 218-227
Author(s): Xiao-Su Chen,Zu-Guo Yu,Juan Zheng

Alignment-Independent Techniques for Protein Classification

Journal: Current Proteomics
Volume: 5 Issue: 4 Year: 2008 Page: 217-223
Author(s): Matthew N. Davies, Andrew Secker, Alex A. Freitas, Jon Timmis, Edward Clark, Darren R. Flower

Review of Common Sequence Alignment Methods: Clues to Enhance Reliability

Journal: Current Genomics
Volume: 4 Issue: 2 Year: 2003 Page: 131-146
Author(s): Christophe Lambert, Jean-Marc Van Campenhout, Xavier DeBolle, Eric Depiereux

Research Article

DSARna: RNA Secondary Structure Alignment Based on Digital Sequence Representation

Journal: Combinatorial Chemistry & High Throughput Screening
Volume: 24 Issue: 7 Year: 2021 Page: 1042-1054
Author(s): Longjian Gao,Chengzhen Xu,Wangan Song,Feng Xiao,Xiaomin Wu,Li Shi,Yuxuan Sun,Jun Li

General Research Article

Geometric Feature of DNA Sequences

Journal: Recent Patents on Engineering
Volume: 18 Issue: 9 Year: 2024 Page: 86-99
Author(s):

In Silico Protein-Protein Interaction Prediction with Sequence Alignment and Classifier Stacking

Journal: Current Protein & Peptide Science
Volume: 12 Issue: 7 Year: 2011 Page: 614-620
Author(s): Simone Marini, Qian Xu, Qiang Yang

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