摘要
背景:电子圆二色性(ECD),旋光性(OR)和振动圆二色性(VCD)等光学性质的量子力学模拟已迅速成为分配新型天然产物绝对构型的流行模式。 目的:我们回顾了ECD / OR / VCD计算方法学在真菌来源的手性代谢物中的应用。首先,我们总结了三种光谱的基本原理,然后,我们将重点放在与计算应用相关的具体实验和计算问题上。 方法:我们调查了描述ECD / OR / VCD计算真菌代谢物使用的整个文献,并根据所采用的方法和化合物的结构族编制了所有文献。然后,我们选择了几个例子来说明这些技术的使用,并强调了计算方法的实际应用。 结果:我们的文献调查表明,ECD / OR / VCD光谱的模拟现在已经广泛存在,对非专家来说也是可用的,尽管为了避免错误的分配,一个好的计算实践是必要的。 ECD仍然是真菌代谢物中最常用的技术。当感兴趣的化合物缺少发色团时,OR和VCD可能是有利的。我们的例子说明,在某些情况下,特别是在存在高度构象灵活性的情况下,两种或更多种手足式方法的结合是强烈建议的,其中单一技术不能导致一个安全的结论。 结论:ECD / OR / VCD计算方法是分配真菌代谢产物和相关天然产物的绝对构型的可靠且通用的方法。
关键词: 结构阐明,天然产物,构象分析,电子圆二色性,振动圆二色性,旋光性,密度泛函理论。
Current Medicinal Chemistry
Title:Absolute Configuration Determination by Quantum Mechanical Calculation of Chiroptical Spectra: Basics and Applications to Fungal Metabolites
Volume: 25 Issue: 2
关键词: 结构阐明,天然产物,构象分析,电子圆二色性,振动圆二色性,旋光性,密度泛函理论。
摘要: Background: Quantum mechanical simulations of chiroptical properties, such as electronic circular dichroism (ECD), optical rotation (OR), and vibrational circular dichroism (VCD), have rapidly become very popular to assign the absolute configuration of novel natural products.
Objective: We review the application of the ECD/OR/VCD computational methodology to chiral metabolites of fungal origin. First, we summarize the fundamentals of the three spectroscopies; then, we focus on the specific experimental and computational issues allied to the application of their calculations.
Methods: We surveyed the entire literature describing the use of ECD/OR/VCD computations for fungal metabolites, and catalogued all papers according to the method employed and to the structural family of compounds. Then, we chose several examples to illustrate the use of the techniques and highlight the practical application of the computational approach.
Results: Our literature survey demonstrates that the simulation of ECD/OR/VCD spectra is nowadays widespread and accessible also to non-experts, although a good computational practice is necessary to avoid wrong assignments. ECD is still the most common technique used in the context of fungal metabolites. OR and VCD may be profitably employed when the compound of interest lacks chromophoric groups. Our examples illustrate that the combination of two or more chiroptical methods is strongly advisable in some cases, especially in the presence of high conformational flexibility, where a single technique does not lead to a safe conclusion.
Conclusion: The ECD/OR/VCD computational approach is a reliable and versatile method to assign the absolute configuration of fungal metabolites and related natural products.
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Cite this article as:
Absolute Configuration Determination by Quantum Mechanical Calculation of Chiroptical Spectra: Basics and Applications to Fungal Metabolites, Current Medicinal Chemistry 2018; 25 (2) . https://dx.doi.org/10.2174/0929867324666170310112009
DOI https://dx.doi.org/10.2174/0929867324666170310112009 |
Print ISSN 0929-8673 |
Publisher Name Bentham Science Publisher |
Online ISSN 1875-533X |
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