A Naturally Logical Representation for DNA Primary Sequences

Chun      Li; Jun      Wang

doi:10.2174/138620707780636619

Abstract

In this paper, we (1) introduce a logical representation (LR) for DNA primary sequences; (2) show relations between LR and some other representations including the characteristic sequences of a DNA sequence, Randics 2-D, 4-D representations, and Z-curve (a 3-D graphical representation); and (3) outline the constructions of the S/S matrix specific for a logical sequence and its 2*2 condensed matrix.

Keywords: DNA sequence, logical representation, condensed matrix, invariant

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Combinatorial Chemistry & High Throughput Screening

Title: A Naturally Logical Representation for DNA Primary Sequences

Volume: 10 Issue: 4

Author(s): Chun Li and Jun Wang

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Keywords: DNA sequence, logical representation, condensed matrix, invariant

Abstract: In this paper, we (1) introduce a logical representation (LR) for DNA primary sequences; (2) show relations between LR and some other representations including the characteristic sequences of a DNA sequence, Randics 2-D, 4-D representations, and Z-curve (a 3-D graphical representation); and (3) outline the constructions of the S/S matrix specific for a logical sequence and its 2*2 condensed matrix.

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Li Chun and Wang Jun, A Naturally Logical Representation for DNA Primary Sequences, Combinatorial Chemistry & High Throughput Screening 2007; 10 (4) . https://dx.doi.org/10.2174/138620707780636619