Analysis of Similarity/Dissimilarity of Long DNA Sequences Based on Three 2DD-Curves

Yusen      Zhang; Wei      Chen

doi:10.2174/138620707780126732

Abstract

Some 2D graphical representations of DNA sequences have been reported by several authors, which give visual characterizations of DNA sequences. In this paper, we present a new 2D graphical representation of DNA sequences without degeneracy. Furthermore, we propose two methods for the visualization and analysis of long DNA sequences.

Keywords: DNA, 2DD-curve, graphical representation, leading eigenvalue

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Combinatorial Chemistry & High Throughput Screening

Title: Analysis of Similarity/Dissimilarity of Long DNA Sequences Based on Three 2DD-Curves

Volume: 10 Issue: 3

Author(s): Yusen Zhang and Wei Chen

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Keywords: DNA, 2DD-curve, graphical representation, leading eigenvalue

Abstract: Some 2D graphical representations of DNA sequences have been reported by several authors, which give visual characterizations of DNA sequences. In this paper, we present a new 2D graphical representation of DNA sequences without degeneracy. Furthermore, we propose two methods for the visualization and analysis of long DNA sequences.

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Zhang Yusen and Chen Wei, Analysis of Similarity/Dissimilarity of Long DNA Sequences Based on Three 2DD-Curves, Combinatorial Chemistry & High Throughput Screening 2007; 10 (3) . https://dx.doi.org/10.2174/138620707780126732