Abstract
As predicted, in the post-genomic era microarray technology has a major impact on our understanding of complex gene expression patterns and circuit function in the brain. We increasingly appreciate that, due to the phenotypic and transcript complexity, brain transcriptome profiling data are multifaceted and are best interpreted in the context of the cellular diversity of the studied brain region. However, despite advances made over the past five years, biological interpretation of massive microarray datasets remains a significant challenge. Although we are becoming more efficient in separating "true" transcriptome differences from experimental noise, verification of microarray data and anatomical localization of expression changes to neuronal subpopulations will continue to be an integral part of brain microarray experiments.
Keywords: neurons, hybridization, NR3A transcript, RT-PCR, gene expression
Current Genomics
Title: Microarrays in Brain Research: Data Quality and Limitations Revisited
Volume: 7 Issue: 1
Author(s): Karoly Mirnics
Affiliation:
Keywords: neurons, hybridization, NR3A transcript, RT-PCR, gene expression
Abstract: As predicted, in the post-genomic era microarray technology has a major impact on our understanding of complex gene expression patterns and circuit function in the brain. We increasingly appreciate that, due to the phenotypic and transcript complexity, brain transcriptome profiling data are multifaceted and are best interpreted in the context of the cellular diversity of the studied brain region. However, despite advances made over the past five years, biological interpretation of massive microarray datasets remains a significant challenge. Although we are becoming more efficient in separating "true" transcriptome differences from experimental noise, verification of microarray data and anatomical localization of expression changes to neuronal subpopulations will continue to be an integral part of brain microarray experiments.
Export Options
About this article
Cite this article as:
Mirnics Karoly, Microarrays in Brain Research: Data Quality and Limitations Revisited, Current Genomics 2006; 7 (1) . https://dx.doi.org/10.2174/138920206776389739
DOI https://dx.doi.org/10.2174/138920206776389739 |
Print ISSN 1389-2029 |
Publisher Name Bentham Science Publisher |
Online ISSN 1875-5488 |
Call for Papers in Thematic Issues
Current Genomics in Cardiovascular Research
Cardiovascular diseases are the main cause of death in the world, in recent years we have had important advances in the interaction between cardiovascular disease and genomics. In this Research Topic, we intend for researchers to present their results with a focus on basic, translational and clinical investigations associated with ...read more
Deep learning in Single Cell Analysis
The field of biology is undergoing a revolution in our ability to study individual cells at the molecular level, and to integrate data from multiple sources and modalities. This has been made possible by advances in technologies for single-cell sequencing, multi-omics profiling, spatial transcriptomics, and high-throughput imaging, as well as ...read more
New insights on Pediatric Tumors and Associated Cancer Predisposition Syndromes
Because of the broad spectrum of children cancer susceptibility, the diagnosis of cancer risk syndromes in children is rarely used in direct cancer treatment. The field of pediatric cancer genetics and genomics will only continue to expand as a result of increasing use of genetic testing tools. It's possible that ...read more
Related Journals
- Author Guidelines
- Graphical Abstracts
- Fabricating and Stating False Information
- Research Misconduct
- Post Publication Discussions and Corrections
- Publishing Ethics and Rectitude
- Increase Visibility of Your Article
- Archiving Policies
- Peer Review Workflow
- Order Your Article Before Print
- Promote Your Article
- Manuscript Transfer Facility
- Editorial Policies
- Allegations from Whistleblowers
- Announcements
Related Articles
-
Determination of Monoaromatic Hydrocarbons in Water Samples by Nano-Liquid Chromatography using a Composite Carbon Nanotubes- Lauryl Polymethacrylate Capillary Monolithic Column
Current Analytical Chemistry Synthesis, Topoisomerase I Inhibitory and Cytotoxic Activities of Chromone Derivatives
Medicinal Chemistry The Uses of Dimedone for the Synthesis of Thiophene, Thiazole and Annulated Derivatives with Antitumor, Pim-1 Kinase Inhibitions, PAINS Evaluations and Molecular Docking
Anti-Cancer Agents in Medicinal Chemistry Synthesis and Electrochemical Behavior of Some Dendritic Polyphenols as Antioxidants
Letters in Organic Chemistry Applications of Aptamers in Targeted Imaging: State of the Art
Current Topics in Medicinal Chemistry Polymer Structures for Sensors and Actuators 1. Analyte Biosensor
Recent Patents on Materials Science New Synthesis of Isoindolo[2,1–b]isoquinolines. Preparation and Aqueous Bioavailability of its Silica Nanoparticles Hybrid System
Current Organic Chemistry Design, Synthesis and Biological Evaluation of 2, 4, 5-Triphenylimidazole Derivatives with Preliminary SAR
Letters in Drug Design & Discovery The Use of Chronobiotics in the Resynchronization of the Sleep/Wake Cycle. Therapeutical Application in the Early Phases of Alzheimer's Disease
Recent Patents on Endocrine, Metabolic & Immune Drug Discovery (Discontinued) Modulation of pRb/E2F Functions in the Regulation of Cell Cycle and in Cancer
Current Cancer Drug Targets Synthesis, Characterization and Antimicrobial Activity of Pyridine-3- Carbonitrile Derivatives
Current Bioactive Compounds Antibody Development and Immunoassays for Polycyclic Aromatic Hydrocarbons (PAHs)
Current Organic Chemistry Probing the Interaction of Anti-Cancer Agent Dihydromyricetin with Human Serum Albumin: A typical Method Study
Anti-Cancer Agents in Medicinal Chemistry Review on Pharmacological and Phytochemical Prospects of Traditional Medicinal Plant: <i>Persicaria hydropiper</i> (Smartweed)
Current Topics in Medicinal Chemistry Radical Releasing Anti-tuberculosis Agents and the Treatment of <i>Mycobacterial Tuberculosis</i> Infections - An Overview
Mini-Reviews in Medicinal Chemistry Silybin and Silymarin - New and Emerging Applications in Medicine
Current Medicinal Chemistry Effects of CAP-regimen Chemotherapy on Blood Redox Status in Patients with Ovarian Cancer
Anti-Cancer Agents in Medicinal Chemistry Aptamers Overview: Selection, Features and Applications
Current Topics in Medicinal Chemistry Molecular Dynamics and Structural Studies of the Ets Domain-DNA Complexes
Current Bioinformatics The Beneficial Effects of QIAPI 1<sup>®</sup> against Pentavalent Arsenic-Induced Lung Toxicity: A Hypothetical Model for SARS CoV2-I nduced Lung Toxicity
Current Pharmaceutical Biotechnology