Search Result "binding pose prediction"


Post Processing of Protein-Compound Docking for Fragment-Based Drug Discovery (FBDD): In-Silico Structure-Based Drug Screening and Ligand-Binding Pose Prediction

Journal: Current Topics in Medicinal Chemistry
Volume: 10 Issue: 6 Year: 2010 Page: 680-694
Author(s): Yoshifumi Fukunishi

Review Article

Structure-based Methods for Binding Mode and Binding Affinity Prediction for Peptide-MHC Complexes

Journal: Current Topics in Medicinal Chemistry
Volume: 18 Issue: 26 Year: 2018 Page: 2239-2255
Author(s): Dinler A. Antunes,Jayvee R. Abella,Didier Devaurs,Maurício M. Rigo,Lydia E. Kavraki

Research Article

MDO: A Computational Protocol for Prediction of Flexible Enzyme-ligandBinding Mode

Journal: Current Computer-Aided Drug Design
Volume: 18 Issue: 6 Year: 2022 Page: 448-458
Author(s): Amar Y. Al-Ansi

Improved Prediction of Protein Ligand-Binding Sites Using Random Forests

Journal: Protein & Peptide Letters
Volume: 18 Issue: 1 Year: 2011 Page: 1212-1218
Author(s): Zhijun Qiu, Xicheng Wang

Research Article

Prediction of Drug-Plasma Protein Binding Using Artificial Intelligence Based Algorithms

Journal: Combinatorial Chemistry & High Throughput Screening
Volume: 21 Issue: 1 Year: 2018 Page: 57-64
Author(s): Rajnish Kumar,Anju Sharma,Mohammed Haris Siddiqui,Rajesh Kumar Tiwari

Analysis and Prediction of RNA-Binding Residues Using Sequence, Evolutionary Conservation, and Predicted Secondary Structure and Solvent Accessibility

Journal: Current Protein & Peptide Science
Volume: 11 Issue: 7 Year: 2010 Page: 609-628
Author(s): Tuo Zhang, Hua Zhang, Ke Chen, Jishou Ruan, Shiyi Shen, Lukasz Kurgan

Review Article

Supervised Machine Learning Methods Applied to Predict Ligand- Binding Affinity

Journal: Current Medicinal Chemistry
Volume: 24 Issue: 23 Year: 2017 Page: 2459-2470
Author(s): Gabriela S. Heck,Val O. Pintro,Richard R. Pereira,Mauricio B. de Ávila,Nayara M.B. Levin,Walter F. de Azevedo

Tuning the Solvation Term in the MM-PBSA/GBSA Binding Affinity Predictions

Ebook: Frontiers in Computational Chemistry
Volume: 1 Year: 2015
Author(s): Irene Maffucci,Alessandro Contini
Doi: 10.2174/9781608058648115010005

Scoring Functions for Prediction of Protein-Ligand Interactions

Journal: Current Pharmaceutical Design
Volume: 19 Issue: 12 Year: 2013 Page: 2174-2182
Author(s): Jui-Chih Wang,Jung-Hsin Lin

In Silico Prediction of Novel Inhibitors of the DNA Binding Activity of FoxG1

Journal: Medicinal Chemistry
Volume: 8 Issue: 6 Year: 2012 Page: 1155-1162
Author(s): Syam Bhuvanachandran Nair, Shaik Mahammad Abdul Fayaz, Rajanikant Golgodu Krishnamurthy

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