摘要
鳜类鱼是一群淡水鲈形目鱼类,东亚当地的物种,在中国具有众多该物种的记载。在现有的研究中,我们分析了在中国扬子江和珠江流域的6种鳜类鱼的完整的基因序列的组成。在分析的鱼群基因中,G的比例相对较低,只有16.2%-16.5%。相似性和三度分析显示这些从不同流域的相同鱼种比在同一流域不同鱼种有更多的序列相似性。点突变的比率为0.39%,同时发现总共有422个突变位点被证实是在12种蛋白编码基因中(包括ND6)存在于四个鳜类鱼群体中。这些进化关系的分析显示了这个四个鳜类鱼群体可能被分散为两个部分——扬子江流域和珠江流域。通过这些数据为鳜类鱼在适应不同环境时基因突变和进化水平,以及渔业和水产养殖中基因的保留和选择性繁殖方面提供了重要信息。
关键词: 线粒体基因组,鳜类鱼,进化分析,点突变。
Current Molecular Medicine
Title:The Genetic Diversity of Sinipercid Fishes Based on Complete Mitochondrial DNA of Six Sinipercid Fishes from Different Drainages in China
Volume: 14 Issue: 10
Author(s): D. Chen, Y. Li, H. Li, K. Wang, S. Du, W. Chu and J. Zhang
Affiliation:
关键词: 线粒体基因组,鳜类鱼,进化分析,点突变。
摘要: Sinipercids are a group of freshwater perciform fish endemic in East Asia with the majority of species recorded in China. In the present study, we analyzed the organizations of complete mitogenomes of the six sinipercid fish populations from the Yangtze River and the Pearl River systems in China. The proportion of G was relatively low just at 16.2%-16.5% among the fish populations analyzed. The similarity and divergence analysis showed that the populations from different drainages have more sequence similarities than those from different species in the same drainages. The rate of point mutation was 0.39% and a total of 422 variable sites were identified in the 12 protein-coding genes (excluding the ND6) among the four S. scherzeri populations. The analysis of evolutionary relationship showed that the four S. scherzeri populations can be divided into two groups of Yangtze River system and the Pearl River. Overall the data provide significant information for the genetic and evolutionary status of sinipercids upon adapting to different environments, and for genetic conservation and selective breeding of these fish species in fishery and aquaculture.
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Cite this article as:
D. Chen, Y. Li, H. Li, K. Wang, S. Du, W. Chu and J. Zhang , The Genetic Diversity of Sinipercid Fishes Based on Complete Mitochondrial DNA of Six Sinipercid Fishes from Different Drainages in China, Current Molecular Medicine 2014; 14 (10) . https://dx.doi.org/10.2174/1566524014666141202162058
DOI https://dx.doi.org/10.2174/1566524014666141202162058 |
Print ISSN 1566-5240 |
Publisher Name Bentham Science Publisher |
Online ISSN 1875-5666 |
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