Structural Fragments in Protein Model Refinement

Title: Structural Fragments in Protein Model Refinement

Volume: 15 Issue: 9

Author(s): S. M. Hollup, W. R. Taylor and I. Jonassen

Affiliation:

Keywords: protein structure prediction, model refinement

Abstract: We survey a method that uses patterns of residue packing in known protein structures to refine structural models. The method can be used to refine models that include only one coordinate point per residue (Cα) and is not dependent on homology. We demonstrate that the method improves both decoy and CASP7 target models.

Cite this article as:

Hollup M. S., Taylor R. W. and Jonassen I., Structural Fragments in Protein Model Refinement, Protein & Peptide Letters 2008; 15 (9) . https://dx.doi.org/10.2174/092986608785849263

DOI https://dx.doi.org/10.2174/092986608785849263	Print ISSN 0929-8665
Publisher Name Bentham Science Publisher	Online ISSN 1875-5305