Abstract
Introduction: Recent studies have shown modified cyclobutene derivatives as potent anti- tubercular agents, and the discovery of drugs against strains of Mycobacterium tuberculosis is still a crucial challenge in the modern world.
Objective: The objective of the present study is to design and perform molecular docking studies and in-silico analysis of some novel cyclobut-3-ene-1,2 Dione derivatives with the aim of creating new, potential Mtb ATP synthase inhibitors.
Materials and Methods: The structures of 24 compounds of diamino-substituted cyclobut-3-ene-1,2 Dione derivatives against Mtb ATP synthase were drawn using ChemSketch. Further, molecular docking and in-silico studies for the prediction of drug-likeness and pharmacokinetic parameters were carried out.
Results: The docking studies of the novel compounds were done, and they had a better docking score with a good binding affinity towards the protein molecule. The synthesized compounds also comply with the in-silico prediction of drug-likeness and pharmacokinetic parameters and have shown good activity against Mtb ATP synthase.
Conclusion: The current study shows that the cyclobut-3-ene-1,2 Dione derivatives can serve as a better lead molecule against Mtb ATP synthase and can be involved in further drug discovery.
Graphical Abstract
[http://dx.doi.org/10.1016/j.tet.2010.05.033]
[http://dx.doi.org/10.1016/j.ejmech.2015.06.007] [PMID: 26092447]
[http://dx.doi.org/10.1016/j.bmc.2011.07.034] [PMID: 21840723]
[http://dx.doi.org/10.1016/j.ejmech.2011.11.033] [PMID: 22182928]
[http://dx.doi.org/10.1016/j.bmc.2022.116896] [PMID: 35777270]
[http://dx.doi.org/10.1016/j.ejmech.2014.10.026] [PMID: 25462220]
[http://dx.doi.org/10.1016/j.molstruc.2023.135556]
[http://dx.doi.org/10.1016/j.ejmech.2012.01.006] [PMID: 22321994]
[http://dx.doi.org/10.1016/j.bmc.2010.05.016] [PMID: 20537903]
[http://dx.doi.org/10.1016/j.carres.2011.06.028] [PMID: 21767828]
[http://dx.doi.org/10.1016/S2213-2600(23)00090-5] [PMID: 36966793]
[http://dx.doi.org/10.1016/j.rmed.2006.08.006] [PMID: 16949809]
[http://dx.doi.org/10.1016/j.cclet.2011.11.017]
[http://dx.doi.org/10.1016/j.ejmech.2015.07.039] [PMID: 26280920]
[http://dx.doi.org/10.1016/j.ejmech.2013.09.041] [PMID: 24140915]
[http://dx.doi.org/10.1016/j.ejmech.2013.12.013] [PMID: 24412719]
[http://dx.doi.org/10.1016/j.ejmech.2009.07.015] [PMID: 19679378]
[http://dx.doi.org/10.1016/j.ejmech.2014.07.100] [PMID: 25089809]
[http://dx.doi.org/10.1101/cshperspect.a017863]
[http://dx.doi.org/10.1016/j.ejmech.2015.02.034] [PMID: 25747550]
[http://dx.doi.org/10.1016/j.bmc.2015.03.041] [PMID: 25818768]
[http://dx.doi.org/10.1016/j.bmc.2013.10.011] [PMID: 24200931]
[http://dx.doi.org/10.1016/j.apsb.2023.01.022] [PMID: 37250168]
[http://dx.doi.org/10.1016/j.molstruc.2023.136540]
[http://dx.doi.org/10.1016/j.molstruc.2023.136901]
[http://dx.doi.org/10.1016/j.ejmech.2023.115637] [PMID: 37524009]
[http://dx.doi.org/10.1016/j.rechem.2023.100889]
[http://dx.doi.org/10.1016/j.tube.2023.102326] [PMID: 36863206]
[http://dx.doi.org/10.1080/10426507.2023.2196079]
[http://dx.doi.org/10.1016/j.ijtb.2023.01.005] [PMID: 37968051]
[http://dx.doi.org/10.1016/j.ejmech.2022.114908] [PMID: 36435016]
[http://dx.doi.org/10.1016/j.ijtb.2022.09.002] [PMID: 37562909]
[http://dx.doi.org/10.1016/j.molstruc.2023.136657]
[http://dx.doi.org/10.1016/j.ejmcr.2023.100102]
[http://dx.doi.org/10.1080/10406638.2023.2225671]
[http://dx.doi.org/10.1016/j.ejmech.2023.115633] [PMID: 37524010]
[http://dx.doi.org/10.1016/j.ejmech.2020.112538] [PMID: 32927218]
[http://dx.doi.org/10.1016/j.ejmech.2022.114896] [PMID: 36370551]
[http://dx.doi.org/10.1016/j.jyp.2013.12.002] [PMID: 24563587]
[http://dx.doi.org/10.1002/jcc.23576] [PMID: 24599647]
[http://dx.doi.org/10.1002/jcc.21707] [PMID: 21425294]
[http://dx.doi.org/10.1016/j.bmcl.2022.128824]
[http://dx.doi.org/10.1016/j.ejmech.2018.11.025]
[http://dx.doi.org/10.1016/j.ejmech.2018.12.001]
[http://dx.doi.org/10.2174/1573409914666181011145922]
[http://dx.doi.org/10.1039/D1RA07377J] [PMID: 35498092]
[http://dx.doi.org/10.1002/jcc.26551] [PMID: 33973667]
[http://dx.doi.org/10.1002/0471250953.bi0814s24] [PMID: 19085980]
[http://dx.doi.org/10.1002/(SICI)1099-1352(199601)9:1<1:AID-JMR241>3.0.CO;2-6] [PMID: 8723313]
[http://dx.doi.org/10.1007/978-1-4939-2269-7_19] [PMID: 25618350]
[http://dx.doi.org/10.1038/srep42717] [PMID: 28256516]
[http://dx.doi.org/10.1164/rccm.202202-0393ED] [PMID: 35320062]
[http://dx.doi.org/10.1016/j.cdc.2021.100647]
[http://dx.doi.org/10.1016/j.ejmech.2022.114454]
[http://dx.doi.org/10.1016/j.ejmech.2022.114531]
[http://dx.doi.org/10.3390/molecules27061845] [PMID: 35335208]
[http://dx.doi.org/10.1007/s10863-012-9486-4] [PMID: 23104121]
[http://dx.doi.org/10.2174/1573409916666200615141047]
[http://dx.doi.org/10.1016/j.bioorg.2019.102969]
[http://dx.doi.org/10.1016/j.molstruc.2018.10.030]
[http://dx.doi.org/10.1038/nature09657] [PMID: 21270886]
[http://dx.doi.org/10.3390/antibiotics8040261] [PMID: 31835707]
[http://dx.doi.org/10.1016/j.jgar.2021.02.017] [PMID: 33684606]
[http://dx.doi.org/10.3390/pathogens11060636] [PMID: 35745490]
[http://dx.doi.org/10.1128/AAC.02418-20] [PMID: 33526488]
[http://dx.doi.org/10.1002/ardp.200290005] [PMID: 12596216]
[http://dx.doi.org/10.1378/chest.62.1.71] [PMID: 4339326]
[http://dx.doi.org/10.1371/journal.pmed.1003023] [PMID: 31961857]
[http://dx.doi.org/10.1128/AAC.01024-12] [PMID: 23208715]
[http://dx.doi.org/10.1177/2042098616667704] [PMID: 27904742]
[http://dx.doi.org/10.1093/jacamr/dlac037] [PMID: 35415609]
[http://dx.doi.org/10.1021/acs.jmedchem.6b01358] [PMID: 28075132]